STRINGSTRING
gsr2449 protein (Gloeobacter violaceus) - STRING interaction network
"gsr2449" - Hypothetical protein in Gloeobacter violaceus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gsr2449Hypothetical protein (92 aa)    
Predicted Functional Partners:
cobD
Cobalamin biosynthetic protein; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group (314 aa)
              0.859
glr2451
Integrase/recombinase (289 aa)
              0.859
glr2450
Hypothetical protein (337 aa)
              0.859
mnmE
tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 (453 aa)
              0.767
gsr0732
Hypothetical protein (73 aa)
   
          0.734
gll1531
Hypothetical protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins (174 aa)
   
          0.731
gll0144
Hypothetical protein (146 aa)
   
          0.725
gll4060
Hypothetical protein (102 aa)
   
          0.695
glr3726
Hypothetical protein (140 aa)
   
          0.665
gsr3796
Hypothetical protein (98 aa)
   
          0.646
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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