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gsr3238 protein (Gloeobacter violaceus) - STRING interaction network
"gsr3238" - Hypothetical protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gsr3238Hypothetical protein (78 aa)    
Predicted Functional Partners:
glr3237
Glucose-1-phosphate thymidylyltransferase (355 aa)
              0.845
glr3235
dTDP-glucose 4-6-dehydratase (346 aa)
              0.845
rfbD
dTDP-6-deoxy-L-mannose-dehydrogenase (300 aa)
              0.845
glr3236
Glycosyl transferase (245 aa)
              0.845
glr3240
Hypothetical protein (433 aa)
              0.595
glr3239
Hypothetical protein (354 aa)
              0.595
ychF
GTP-dependent nucleic acid-binding protein EngD; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner (364 aa)
              0.593
gsr3242
Hypothetical protein (96 aa)
              0.579
glr3241
Capsular polysaccharide biosynthesis protein, CapC-like protein (261 aa)
              0.579
glr3243
Hypothetical protein (540 aa)
              0.561
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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