STRINGSTRING
gsr3474 protein (Gloeobacter violaceus) - STRING interaction network
"gsr3474" - Hypothetical protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gsr3474Hypothetical protein (95 aa)    
Predicted Functional Partners:
glr3475
Hypothetical protein (176 aa)
 
   
  0.982
gll1199
Hypothetical protein (175 aa)
 
        0.860
gsl1200
Hypothetical protein (96 aa)
   
          0.666
glr3473
Hypothetical protein (403 aa)
              0.642
glr3472
ABC transporter ATP-binding protein (313 aa)
              0.642
gll3471
Hypothetical protein (197 aa)
              0.484
glr2725
Hypothetical protein (185 aa)
   
          0.481
gll3470
Hypothetical protein (506 aa)
              0.424
gll3469
Hypothetical protein (226 aa)
              0.424
glr2724
Hypothetical protein (122 aa)
   
          0.404
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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