STRINGSTRING
gsr3505 protein (Gloeobacter violaceus) - STRING interaction network
"gsr3505" - Hypothetical protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gsr3505Hypothetical protein (99 aa)    
Predicted Functional Partners:
gsr3504
Hypothetical protein (88 aa)
 
          0.967
gsr2534
Hypothetical protein (91 aa)
 
          0.780
gsr3999
Hypothetical protein (88 aa)
 
          0.754
gsl0167
Hypothetical protein (99 aa)
   
          0.682
gsl4117
Hypothetical protein (80 aa)
 
          0.598
glr3160
Hypothetical protein (928 aa)
   
          0.510
glr3506
3-oxoacyl-ACP reductase (248 aa)
              0.502
glr3161
Hypothetical protein (972 aa)
   
          0.496
glr3503
NADH dehydrogenase (406 aa)
              0.443
gsl0810
Hypothetical protein (95 aa)
   
          0.436
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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