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gsr3810 protein (Gloeobacter violaceus) - STRING interaction network
"gsr3810" - Hypothetical protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gsr3810Hypothetical protein (89 aa)    
Predicted Functional Partners:
glr3809
Hypothetical protein (526 aa)
              0.801
glr1121
Hypothetical protein (151 aa)
   
          0.623
glr1104
Beta-hydroxylase (116 aa)
   
          0.542
gll3808
AraC family transcriptional regulator (293 aa)
              0.540
gsl0167
Hypothetical protein (99 aa)
   
          0.530
hemD
Uroporphyrinogen III synthase/methyltransferase (508 aa)
              0.463
glr3811
Hypothetical protein (212 aa)
              0.439
glr1858
Hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves (158 aa)
   
        0.423
trpS
tryptophanyl-tRNA synthetase (336 aa)
   
        0.416
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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