STRINGSTRING
gsr4179 protein (Gloeobacter violaceus) - STRING interaction network
"gsr4179" - Hypothetical protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gsr4179Hypothetical protein (82 aa)    
Predicted Functional Partners:
gll2537
Hypothetical protein (293 aa)
   
          0.713
glr2915
Hypothetical protein (102 aa)
 
          0.704
glr4181
tRNA/rRNA methyltransferase (338 aa)
              0.693
mrnC
Hypothetical protein; Involved in correct processing of both the 5’ and 3’ ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors (106 aa)
              0.693
cpcT4
Hypothetical protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins (183 aa)
   
          0.681
glr0819
Hypothetical protein (467 aa)
   
          0.679
cupB
Hypothetical protein (375 aa)
   
          0.674
glr3263
Hypothetical protein (148 aa)
   
          0.673
gll2630
Hypothetical protein (429 aa)
   
          0.659
gsr2714
CAB/ELIP/HLIP superfamily protein (53 aa)
   
          0.640
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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