STRINGSTRING
ycf37 protein (Gloeobacter violaceus) - STRING interaction network
"ycf37" - Hypothetical protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ycf37Hypothetical protein (173 aa)    
Predicted Functional Partners:
gsl0285
Hypothetical protein (76 aa)
              0.859
gsl0284
Hypothetical protein (85 aa)
              0.859
gll1546
Hypothetical protein (294 aa)
   
        0.779
glr3240
Hypothetical protein (433 aa)
 
        0.777
gll4088
Hypothetical protein (208 aa)
   
        0.772
gll3542
Hypothetical protein (436 aa)
   
        0.767
glr1207
Hypothetical protein (535 aa)
   
        0.765
glr3567
Hypothetical protein (236 aa)
   
          0.763
glr1650
Hypothetical protein (267 aa)
   
          0.751
glr2389
Hypothetical protein (783 aa)
   
          0.750
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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