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gll0394 protein (Gloeobacter violaceus) - STRING interaction network
"gll0394" - Beta-carotene ketolase in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll0394Beta-carotene ketolase (573 aa)    
Predicted Functional Partners:
gll1923
Phytoene dehydrogenase (654 aa)
   
 
  0.941
gll3598
Hypothetical protein (669 aa)
     
 
  0.937
gll1728
Beta-carotene ketolase (257 aa)
   
 
  0.909
gll2484
Hypothetical protein (514 aa)
     
 
  0.905
pys
Phytoene synthase (317 aa)
 
   
  0.895
crtE
Geranylgeranyl pyrophosphate synthase (295 aa)
   
   
  0.759
glr1356
Hypothetical protein (315 aa)
 
     
  0.759
gll2282
Hypothetical protein (351 aa)
   
          0.749
gll0283
Tocopherol phytyltransferase (298 aa)
 
   
  0.693
glr0395
Hypothetical protein (308 aa)
              0.598
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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