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crtE protein (Gloeobacter violaceus) - STRING interaction network
"crtE" - Geranylgeranyl pyrophosphate synthase in Gloeobacter violaceus
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
crtEGeranylgeranyl pyrophosphate synthase (295 aa)    
Predicted Functional Partners:
pys
Phytoene synthase (317 aa)
   
  0.988
ispH
4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Converts 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP) (417 aa)
 
  0.965
chlP
Geranylgeranyl hydrogenase (398 aa)
   
  0.954
uppS
Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids (249 aa)
 
  0.939
glr4058
Farnesyl-diphosphate farnesyltransferase (363 aa)
   
  0.932
sds
Solanesyl diphosphate synthase (325 aa)
 
 
0.929
dxs
1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) (638 aa)
   
  0.860
crtH
Hypothetical protein (503 aa)
   
   
  0.796
pds
Phytoene dehydrogenase (560 aa)
   
   
  0.796
shc
Squalene-hopene cyclase (637 aa)
 
   
  0.771
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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