STRINGSTRING
cupA protein (Gloeobacter violaceus) - STRING interaction network
"cupA" - Hypothetical protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cupAHypothetical protein (436 aa)    
Predicted Functional Partners:
glr1003
NAD(P)H-quinone oxidoreductase subunit F (602 aa)
 
 
 
  0.999
glr1006
Hypothetical protein (134 aa)
 
 
 
  0.997
glr1004
NAD(P)H-quinone oxidoreductase subunit M (504 aa)
 
 
 
  0.980
gll2082
NAD(P)H-quinone oxidoreductase subunit D4 (510 aa)
     
 
  0.898
gll2083
NAD(P)H-quinone oxidoreductase subunit F (618 aa)
 
 
 
  0.822
glr4273
Hypothetical protein (231 aa)
     
 
  0.778
glr4052
Hypothetical protein (169 aa)
     
 
  0.778
glr2150
Hypothetical protein (167 aa)
     
 
  0.778
gll3681
Hypothetical protein (103 aa)
   
          0.777
gsr2714
CAB/ELIP/HLIP superfamily protein (53 aa)
   
          0.776
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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