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gdhA protein (Gloeobacter violaceus) - STRING interaction network
"gdhA" - Glutamate dehydrogenase in Gloeobacter violaceus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gdhAGlutamate dehydrogenase (458 aa)    
Predicted Functional Partners:
glsF
Ferredoxin-dependent glutamate synthase (1534 aa)
   
  0.999
putA
1-pyrroline-5-carboxylate dehydrogenase (996 aa)
 
  0.972
glnA
Glutamate--ammonia ligase (472 aa)
   
 
  0.943
gll2499
Glutamine synthetase III (436 aa)
   
 
  0.939
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate (325 aa)
     
 
  0.938
glr2600
Aspartate aminotransferase (395 aa)
   
 
  0.923
argJ
Bifunctional ornithine acetyltransferase/N-acetylglutamate synthase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis- the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate (406 aa)
     
  0.918
nirA
Ferredoxin-nitrite reductase (518 aa)
         
  0.913
glr3848
Aldehyde dehydrogenase (498 aa)
 
  0.907
glr3012
Citrate synthase (380 aa)
     
 
  0.905
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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