STRINGSTRING
cpeR protein (Gloeobacter violaceus) - STRING interaction network
"cpeR" - Hypothetical protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cpeRHypothetical protein (104 aa)    
Predicted Functional Partners:
cpcT3
Hypothetical protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins (203 aa)
       
  0.930
cpeS
Hypothetical protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins (180 aa)
       
  0.912
cpeC
Phycoerythrin-associated linker protein (285 aa)
       
  0.852
cpeY
Phycoerythrin lyase subunit (428 aa)
         
  0.838
cpeZ
Phycoerythrin lyase subunit (204 aa)
         
  0.838
cpeB
Phycoerythrin beta subunit (177 aa)
         
  0.838
cpeA
Phycoerythrin alpha chain (164 aa)
         
  0.838
gll1255
Bilin biosynthesis protein MpeU-like protein (290 aa)
       
    0.800
cpcT2
Hypothetical protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins (202 aa)
         
  0.637
glr2394
ATP-dependent DNA helicase (793 aa)
           
  0.559
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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