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apcE protein (Gloeobacter violaceus) - STRING interaction network
"apcE" - Phycobilisome core-membrane linker protein in Gloeobacter violaceus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
apcEPhycobilisome core-membrane linker protein (1155 aa)    
Predicted Functional Partners:
apcA
Allophycocyanin alpha subunit (161 aa)
 
   
  0.992
apcD
allophycocyanin-B (161 aa)
   
   
  0.992
apcC
Phycobilisome small core linker polypeptide; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer (69 aa)
 
   
  0.988
apcF
Phycobilisome core component (161 aa)
   
   
  0.972
cpcA
Phycocyanin alpha chain (162 aa)
   
     
  0.959
gvip155
Phycocyanin alpha chain (162 aa)
   
     
  0.959
cpcB
Phycocyanin beta chain (172 aa)
   
     
  0.957
gvip154
Phycocyanin beta chain (172 aa)
   
     
  0.957
cpcE
Phycocyanobilin lyase alpha subunit (247 aa)
   
     
  0.956
cpcF
Phycocyanobilin lyase alpha subunit (193 aa)
   
     
  0.951
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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