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apcB protein (Gloeobacter violaceus) - STRING interaction network
"apcB" - Allophycocyanin beta subunit in Gloeobacter violaceus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
apcBAllophycocyanin beta subunit (161 aa)    
Predicted Functional Partners:
apcA
Allophycocyanin alpha subunit (161 aa)
 
 
0.999
apcC
Phycobilisome small core linker polypeptide; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer (69 aa)
 
   
  0.995
apcD
allophycocyanin-B (161 aa)
   
 
0.950
apcE
Phycobilisome core-membrane linker protein (1155 aa)
 
   
0.934
cpcT2
Hypothetical protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins (202 aa)
   
     
  0.918
cpcE
Phycocyanobilin lyase alpha subunit (247 aa)
   
     
  0.910
pcyA
Phycocyanobilin-ferredoxin oxidoreductase; Catalyzes the four-electron reduction of biliverdin IX- alpha (2-electron reduction at both the A and D rings); the reaction proceeds via an isolatable 2-electron intermediate, 181,182-dihydrobiliverdin (253 aa)
   
     
  0.861
petJ
Cytochrome c553; Functions as an electron carrier between membrane-bound cytochrome b6-f and photosystem I in oxygenic photosynthesis (112 aa)
   
     
  0.856
cpcF
Phycocyanobilin lyase alpha subunit (193 aa)
   
     
  0.853
cpcT3
Hypothetical protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins (203 aa)
   
     
  0.820
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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