STRINGSTRING
apcC protein (Gloeobacter violaceus) - STRING interaction network
"apcC" - Phycobilisome small core linker polypeptide in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
apcCPhycobilisome small core linker polypeptide; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer (69 aa)    
Predicted Functional Partners:
apcA
Allophycocyanin alpha subunit (161 aa)
 
 
  0.995
apcB
Allophycocyanin beta subunit (161 aa)
 
   
  0.995
apcE
Phycobilisome core-membrane linker protein (1155 aa)
 
   
  0.988
apcD
allophycocyanin-B (161 aa)
   
   
  0.959
cpcE
Phycocyanobilin lyase alpha subunit (247 aa)
   
     
  0.957
apcF
Phycobilisome core component (161 aa)
   
   
    0.953
gll3219
Phycocyanin-associated rod linker protein (219 aa)
   
     
  0.930
cpeC
Phycoerythrin-associated linker protein (285 aa)
   
     
  0.930
glr0950
Phycocyanin-associated rod linker protein (219 aa)
   
     
  0.930
cpcF
Phycocyanobilin lyase alpha subunit (193 aa)
   
     
  0.889
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
Server load: low (14%) [HD]