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nirA protein (Gloeobacter violaceus) - STRING interaction network
"nirA" - Ferredoxin-nitrite reductase in Gloeobacter violaceus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nirAFerredoxin-nitrite reductase (518 aa)    
Predicted Functional Partners:
narB
Nitrate reductase (692 aa)
 
   
  0.992
glnA
Glutamate--ammonia ligase (472 aa)
         
  0.982
petH
ferredoxin-NADP reductase (296 aa)
   
 
  0.975
hemD
Uroporphyrinogen III synthase/methyltransferase (508 aa)
 
 
  0.967
cysH
Phosphoadenosine phosphosulfate; Reduction of activated sulfate into sulfite (241 aa)
   
  0.965
cobA
uroporphyrin-III C-methyltransferase (246 aa)
 
 
  0.947
gll2499
Glutamine synthetase III (436 aa)
         
  0.934
ntcB
Nitrogen assimilation transcriptional activator (326 aa)
         
  0.922
gdhA
Glutamate dehydrogenase (458 aa)
         
  0.913
sat
Sulfate adenylyltransferase (392 aa)
 
   
  0.902
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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