STRINGSTRING
trxA protein (Gloeobacter violaceus) - STRING interaction network
"trxA" - Thiol:disulfide interchange protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trxAThiol-disulfide interchange protein (179 aa)    
Predicted Functional Partners:
glr1717
Anthranilate synthase component I (508 aa)
              0.859
ccdA
C-type cytochrome biogenesis protein (242 aa)
 
     
  0.824
glr1720
Hypothetical protein (162 aa)
              0.784
gsl1716
Hypothetical protein (89 aa)
              0.652
glr1721
Hypothetical protein (363 aa)
              0.550
glr3090
Gamma-tocopherol methyltransferase (281 aa)
   
          0.443
gll0880
Thioredoxin (110 aa)
   
     
  0.441
gll2901
Hypothetical protein (150 aa)
   
          0.438
gsr2010
Hypothetical protein (97 aa)
   
          0.431
gll2939
Hypothetical protein (350 aa)
   
          0.414
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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