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gll1728 protein (Gloeobacter violaceus) - STRING interaction network
"gll1728" - Beta-carotene ketolase in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll1728Beta-carotene ketolase (257 aa)    
Predicted Functional Partners:
gll1923
Phytoene dehydrogenase (654 aa)
     
 
  0.913
gll2484
Hypothetical protein (514 aa)
     
 
  0.913
gll3598
Hypothetical protein (669 aa)
     
 
  0.913
gll0394
Beta-carotene ketolase (573 aa)
   
 
  0.909
def1
Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions (275 aa)
   
        0.670
glr0050
Hypothetical protein (324 aa)
 
          0.666
glr3935
Hypothetical protein (274 aa)
 
          0.654
glr0738
Hypothetical protein (197 aa)
   
          0.593
gll4265
Hypothetical protein (294 aa)
   
          0.588
gll0260
Hypothetical protein (217 aa)
   
          0.588
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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