STRINGSTRING
pys protein (Gloeobacter violaceus) - STRING interaction network
"pys" - Phytoene synthase in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pysPhytoene synthase (317 aa)    
Predicted Functional Partners:
pds
Phytoene dehydrogenase (560 aa)
 
  0.995
crtE
Geranylgeranyl pyrophosphate synthase (295 aa)
   
  0.988
crtH
Hypothetical protein (503 aa)
 
   
  0.954
sds
Solanesyl diphosphate synthase (325 aa)
   
  0.933
glr3257
Hypothetical protein (322 aa)
 
 
    0.915
chlP
Geranylgeranyl hydrogenase (398 aa)
   
 
  0.908
gll3484
Hypothetical protein (228 aa)
 
 
    0.907
glr1460
Hypothetical protein (292 aa)
 
 
    0.907
glr2279
Hypothetical protein (291 aa)
 
 
    0.907
gll2384
Hypothetical protein (396 aa)
     
 
    0.897
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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