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cmpC protein (Gloeobacter violaceus) - STRING interaction network
"cmpC" - Bicarbonate transport system ATP-binding protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cmpCBicarbonate transport system ATP-binding protein (666 aa)    
Predicted Functional Partners:
cmpB
Bicarbonate transport system permease (278 aa)
 
 
  0.995
cmpD
Bicarbonate transport system ATP-binding protein (269 aa)
 
 
0.992
cmpA
Bicarbonate transport system substrate-binding protein (448 aa)
 
 
0.974
nrtB
Nitrate/nitrite transport system permease (281 aa)
 
   
  0.946
nrtC
Nitrate/nitrite transport system ATP-binding protein (655 aa)
 
   
0.911
gll0958
Urea amidolyase (1202 aa)
         
  0.872
gll3412
Hypothetical protein (395 aa)
   
   
  0.868
gll0173
ABC transporter permease (283 aa)
   
  0.827
ecaB
Periplasmic beta-type carbonic anhydrase; Reversible hydration of carbon dioxide (234 aa)
   
   
  0.825
nrtA
Nitrate/nitrite transport system substrate-binding protein (427 aa)
 
   
0.790
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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