STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbcSRibulose 1,5-bisphosphate carboxylase/oxygenase small subunit; ORF_ID:glr2158; bifunctional. (106 aa)    
Predicted Functional Partners:
rbcL
Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site.
 
 0.999
prk-3
Phosphoribulokinase; ORF_ID:glr4424.
 
  
 0.989
prk-2
Phosphoribulokinase; ORF_ID:glr2296.
 
  
 0.988
ccmM
Carbon dioxide concentrating mechanism protein; ORF_ID:gll2093.
    
 
 0.984
prk
Phosphoribulokinase; ORF_ID:gll2122.
 
  
 0.981
rbcX
RbcX protein; ORF_ID:glr2157; hypothetical protein.
     
 0.949
pgk
Phosphoglycerate kinase; ORF_ID:glr2313; Belongs to the phosphoglycerate kinase family.
    
 0.946
gll0254
ORF_ID:gll0254; probable hydrolase.
    
 0.904
gll2598
ORF_ID:gll2598; hypothetical protein.
     
  0.900
glr2159
ORF_ID:glr2159; hypothetical protein.
 
 
   0.874
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus PCC 7421, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421
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