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rpsU1 protein (Gloeobacter violaceus) - STRING interaction network
"rpsU1" - 30S ribosomal protein S21 in Gloeobacter violaceus
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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Experiments
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[Homology]
Score
rpsU130S ribosomal protein S21 (59 aa)    
Predicted Functional Partners:
rpsT
30S ribosomal protein S20; Binds directly to 16S ribosomal RNA (102 aa)
   
 
  0.908
rpsO
30S ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA (89 aa)
     
 
  0.892
rpsJ
30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes (104 aa)
   
 
  0.887
rpsP
30S ribosomal protein S16 (89 aa)
   
 
  0.886
rpsL
30S ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy (135 aa)
     
 
  0.869
rps9
30S ribosomal protein S9 (133 aa)
     
 
  0.866
rps6
30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA (96 aa)
   
 
  0.860
rpsR
30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit (74 aa)
   
 
  0.860
rplJ
50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors (192 aa)
     
 
  0.857
rpsK
30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome (130 aa)
   
 
  0.857
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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