STRINGSTRING
pilC protein (Gloeobacter violaceus) - STRING interaction network
"pilC" - Pilin biogenesis protein in Gloeobacter violaceus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pilCPilin biogenesis protein (410 aa)    
Predicted Functional Partners:
pilT
Twitching motility protein (385 aa)
 
   
  0.988
pilB
Pilus biogenesis protein homologous (642 aa)
 
   
  0.973
glr2433
Type 4 prepilin peptidase; Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue (269 aa)
 
   
  0.949
gll0921
General secretion pathway protein E (525 aa)
 
   
  0.912
gll3884
Hypothetical protein (621 aa)
 
   
  0.880
gll0920
Hypothetical protein (632 aa)
 
   
  0.864
glr2434
Hypothetical protein (343 aa)
 
   
  0.863
glr2438
Hypothetical protein (493 aa)
 
   
  0.851
grpE
Heat shock protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP- depe [...] (196 aa)
         
  0.710
glr2668
RNA polymerase sigma factor SigF (254 aa)
              0.566
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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