STRINGSTRING
pilB protein (Gloeobacter violaceus) - STRING interaction network
"pilB" - Pilus biogenesis protein homologous in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pilBPilus biogenesis protein homologous (642 aa)    
Predicted Functional Partners:
pilC
Pilin biogenesis protein (410 aa)
 
   
  0.973
glr2433
Type 4 prepilin peptidase; Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue (269 aa)
 
 
  0.916
pilT
Twitching motility protein (385 aa)
 
   
0.907
gll0920
Hypothetical protein (632 aa)
 
   
  0.870
glr2438
Hypothetical protein (493 aa)
 
   
  0.850
glr2434
Hypothetical protein (343 aa)
 
   
  0.746
glr2668
RNA polymerase sigma factor SigF (254 aa)
              0.673
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity (419 aa)
         
  0.471
glr3426
Hypothetical protein (214 aa)
         
  0.459
glr2669
Two-component response regulator (245 aa)
       
  0.451
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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