STRINGSTRING
glcD protein (Gloeobacter violaceus) - STRING interaction network
"glcD" - Glycolate oxidase subunit in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glcDGlycolate oxidase subunit (489 aa)    
Predicted Functional Partners:
glcF
Glycolate oxidase iron-sulfur subunit (448 aa)
 
  0.992
glcE
Glycolate oxidase subunit (435 aa)
 
 
0.923
gll4271
KHG-KDPG bifunctional aldolase (221 aa)
         
  0.902
gll0254
Hydrolase (222 aa)
       
    0.901
glr0530
Glyceraldehyde-3-phosphate dehydrogenase (338 aa)
       
 
  0.830
gll3325
Glyceraldehyde-3-phosphate dehydrogenase (343 aa)
       
 
  0.828
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP (551 aa)
   
   
  0.822
eno
Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis (425 aa)
     
   
  0.787
pgk
Phosphoglycerate kinase (407 aa)
     
   
  0.785
gll1597
transaldolase/EF-hand domain-containing protein; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway (389 aa)
         
  0.784
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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