STRINGSTRING
ycf81 protein (Gloeobacter violaceus) - STRING interaction network
"ycf81" - Hypothetical protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ycf81Hypothetical protein (360 aa)    
Predicted Functional Partners:
hemN
Coproporphyrinogen III oxidase (408 aa)
   
   
  0.738
glr2232
Hypothetical protein (173 aa)
   
          0.648
gll2588
Endopeptidase Clp ATP-binding chain (348 aa)
 
          0.540
gll2068
Endopeptidase Clp ATP-binding chain (330 aa)
 
          0.539
glr2993
Hypothetical protein (174 aa)
 
          0.530
gll0152
Hypothetical protein (148 aa)
 
          0.500
glr0848
Hypothetical protein (157 aa)
   
          0.459
glr3087
Hypothetical protein (1054 aa)
              0.448
gll3084
Mannose-1-phosphate guanylyltransferase (327 aa)
              0.441
gsl3083
Hypothetical protein (94 aa)
              0.440
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
Server load: low (15%) [HD]