STRINGSTRING
icd protein (Gloeobacter violaceus) - STRING interaction network
"icd" - Isocitrate dehydrogenase in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
icdIsocitrate dehydrogenase (359 aa)    
Predicted Functional Partners:
glr4087
Aconitate hydratase (645 aa)
 
  0.979
leuC
Isopropylmalate isomerase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate (473 aa)
 
 
  0.963
ilvB
Acetolactate synthase (545 aa)
 
  0.959
gll3998
Isocitrate dehydrogenase (409 aa)
   
  0.955
glsF
Ferredoxin-dependent glutamate synthase (1534 aa)
   
   
  0.932
glr3012
Citrate synthase (380 aa)
 
 
  0.904
glr3418
Isopropylmalate isomerase small subunit (206 aa)
 
 
  0.881
gll2290
2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) (538 aa)
 
 
  0.859
gll2805
Succinate-semialdehyde dehydrogenase (462 aa)
   
  0.854
argH
Argininosuccinate lyase (468 aa)
   
 
  0.841
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
Server load: low (8%) [HD]