STRINGSTRING
comA protein (Gloeobacter violaceus) - STRING interaction network
"comA" - Hypothetical protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
comAHypothetical protein (474 aa)    
Predicted Functional Partners:
glr3379
Hypothetical protein (114 aa)
   
          0.761
gsr2714
CAB/ELIP/HLIP superfamily protein (53 aa)
   
          0.756
cupB
Hypothetical protein (375 aa)
   
          0.753
glr3301
Hypothetical protein (146 aa)
   
          0.745
gll2630
Hypothetical protein (429 aa)
   
          0.744
gll3272
Hypothetical protein (101 aa)
              0.738
glr2644
Hypothetical protein (106 aa)
   
          0.736
gsl1695
Hypothetical protein (93 aa)
   
          0.724
apcC
Phycobilisome small core linker polypeptide; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer (69 aa)
   
          0.722
gsr2523
Hypothetical protein (81 aa)
   
          0.721
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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