STRINGSTRING
ycf45 protein (Gloeobacter violaceus) - STRING interaction network
"ycf45" - Hypothetical protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ycf45Hypothetical protein (535 aa)    
Predicted Functional Partners:
ndhN
Hypothetical protein; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon- concentration (159 aa)
 
          0.884
gll3769
Hypothetical protein (351 aa)
              0.860
gll3771
Hypothetical protein (334 aa)
              0.762
gll3496
Hypothetical protein (157 aa)
   
        0.727
gll3773
dTDP-glucose 4-6-dehydratase (311 aa)
              0.719
gll3772
Hypothetical protein (311 aa)
              0.719
gll2630
Hypothetical protein (429 aa)
   
          0.699
cupB
Hypothetical protein (375 aa)
   
          0.691
gsr2714
CAB/ELIP/HLIP superfamily protein (53 aa)
   
          0.660
gll3816
Hypothetical protein (352 aa)
   
          0.643
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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