STRINGSTRING
gll3805 protein (Gloeobacter violaceus) - STRING interaction network
"gll3805" - Hypothetical protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll3805Hypothetical protein (124 aa)    
Predicted Functional Partners:
gll3802
Hypothetical protein (511 aa)
 
          0.951
gll3806
Hypothetical protein (536 aa)
 
          0.940
gll3803
Hypothetical protein (215 aa)
 
          0.939
gsl3804
Hypothetical protein (70 aa)
              0.859
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits (73 aa)
   
          0.775
glr0196
Hypothetical protein (129 aa)
   
          0.773
ycf34
Hypothetical protein (80 aa)
   
          0.772
glr0411
Hypothetical protein (127 aa)
   
          0.770
glr2814
Hypothetical protein (139 aa)
   
          0.766
gsl3751
Hypothetical protein (95 aa)
   
          0.764
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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