STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FHL15_011203H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (223 aa)    
Predicted Functional Partners:
FHL15_003976
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.979
FHL15_011084
PUA domain-containing protein.
   
 0.970
FHL15_011186
TruB_N domain-containing protein.
   
 0.924
FHL15_009156
Uncharacterized protein.
   
 0.916
FHL15_005743
Uncharacterized protein.
   
 0.909
FHL15_001028
Uncharacterized protein.
    
 0.892
FHL15_006100
Uncharacterized protein.
   
 
 0.885
FHL15_008817
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.825
FHL15_003454
Uncharacterized protein.
   
 
 0.809
FHL15_006393
Nop domain-containing protein.
  
 
 0.807
Your Current Organism:
Xylaria flabelliformis
NCBI taxonomy Id: 2512241
Other names: Sphaeria flabelliformis, X. flabelliformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.