STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_0851PFAM: Protein of unknown function (DUF2808); KEGG: npu:Npun_R3476 hypothetical protein; SPTR: Putative uncharacterized protein. (184 aa)    
Predicted Functional Partners:
Chro_3787
PFAM: Domain of unknown function (DUF1830); InterPro IPR014964; KEGG: cyt:cce_2729 hypothetical protein; PFAM: Domain of unknown function DUF1830; SPTR: Putative uncharacterized protein.
  
     0.726
Chro_1231
COGs: COG5305 membrane protein; KEGG: npu:Npun_R6206 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.699
Chro_0694
COGs: COG5305 membrane protein; KEGG: npu:Npun_R6206 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.647
Chro_5068
COGs: COG5305 membrane protein; KEGG: npu:Npun_R6206 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.639
Chro_4512
AAA ATPase central domain protein; PFAM: ATPase family associated with various cellular activities (AAA); InterPro IPR003959; KEGG: npu:Npun_R1279 hypothetical protein; PFAM: AAA ATPase central domain protein; SPTR: Putative uncharacterized protein.
    
 0.623
Chro_4696
Transposase; KEGG: cyt:cce_5084 transposase; SPTR: Putative transposase.
  
 
   0.576
Chro_4720
PFAM: Amidohydrolase; COGs: COG2159 metal-dependent hydrolase of the TIM-barrel fold; InterPro IPR006992; KEGG: mpa:MAP1627 hypothetical protein; PFAM: amidohydrolase 2; SPTR: Amidohydrolase family.
  
     0.573
Chro_0568
PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein; InterPro IPR017871:IPR005242; KEGG: ter:Tery_2638 hypothetical protein; SPTR: Hypothetical membrane protein.
  
     0.564
Chro_2213
Hypothetical protein; COGs: COG3221 ABC-type phosphate/phosphonate transport system periplasmic component; KEGG: gvi:glr0659 hypothetical protein; SPTR: Glr0659 protein.
  
     0.555
Chro_5529
PFAM: HupE / UreJ protein; COGs: COG2370 Hydrogenase/urease accessory protein; KEGG: syf:Synpcc7942_1373 hydrogenase accessory protein; SPTR: HupE / UreJ protein.
  
     0.546
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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