STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_1391PFAM: NUDIX domain; InterPro IPR000086; KEGG: npu:Npun_R3767 NUDIX hydrolase; PFAM: NUDIX hydrolase; SPTR: NUDIX hydrolase. (146 aa)    
Predicted Functional Partners:
Chro_1390
KEGG: npu:Npun_R3768 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.750
Chro_1446
KEGG: npu:Npun_R5241 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.650
Chro_5110
PFAM: Pentapeptide repeats (8 copies); COGs: COG1357 Uncharacterized low-complexity protein; InterPro IPR001646; KEGG: ava:Ava_0753 pentapeptide repeat-containing protein; PFAM: pentapeptide repeat protein; SPTR: Pentapeptide repeat.
  
     0.638
Chro_0620
KEGG: npu:Npun_R4248 hypothetical protein; SPTR: Putative uncharacterized protein.
 
   
 0.614
Chro_1557
KEGG: ava:Ava_2529 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.578
Chro_0409
KEGG: npu:Npun_F3847 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.571
Chro_4506
KEGG: ava:Ava_4458 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.568
Chro_4783
KEGG: ana:alr4310 hypothetical protein; SPTR: Alr4310 protein.
  
     0.559
Chro_2438
PFAM: Protein of unknown function (DUF3038); KEGG: npu:Npun_F0108 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.553
Chro_4509
KEGG: npu:Npun_R2777 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.541
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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