STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_2820Haloacid dehalogenase, type II; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase; 2-haloalkanoic acid dehalogenase, type II; COGs: COG1011 hydrolase (HAD superfamily); InterPro IPR005834:IPR005833:IPR006328:IPR006388; KEGG: npu:Npun_F5304 haloacid dehalogenase, type II; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: Haloacid dehalogenase, type II; TIGRFAM: haloacid d [...] (269 aa)    
Predicted Functional Partners:
Chro_5499
PFAM: Aldehyde dehydrogenase family; COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR016160:IPR012394:IPR015590; KEGG: npu:Npun_F0840 aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; SPTR: Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.901
Chro_3914
Protein of unknown function DUF1486; InterPro IPR009959; KEGG: ava:Ava_C0110 hypothetical protein; PFAM: protein of unknown function DUF1486; SPTR: Putative uncharacterized protein.
  
   0.720
Chro_2819
PFAM: Bacterial regulatory proteins, gntR family; FCD domain; COGs: COG1802 Transcriptional regulators; InterPro IPR000524:IPR011711; KEGG: ara:Arad_12370 transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; SPTR: Transcriptional regulator.
       0.655
Chro_2222
PFAM: Phosphoglycerate mutase family; InterPro IPR013078; KEGG: ddr:Deide_3p00300 putative phosphoglycerate mutase family, precursor; PFAM: Phosphoglycerate mutase; SPTR: Putative uncharacterized protein.
  
     0.446
Chro_3560
PFAM: Copper amine oxidase, N2 domain; Copper amine oxidase, N3 domain; Copper amine oxidase, enzyme domain; COGs: COG3733 Cu2+-containing amine oxidase; InterPro IPR000269:IPR015800:IPR015802:IPR015798; KEGG: ana:alr3431 tyramine oxidase; PFAM: Copper amine oxidase domain-containing protein; Copper amine oxidase N3-terminal; Copper amine oxidase N2-terminal; SPTR: Copper amine oxidase.
  
    0.422
Chro_2818
Hypothetical protein; KEGG: tva:TVAG_268110 viral A-type inclusion protein; SPTR: Viral A-type inclusion protein, putative.
       0.415
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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