STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_3240PFAM: Mo-dependent nitrogenase C-terminus; InterPro IPR009717; KEGG: ava:Ava_4669 Mo-dependent nitrogenase-like; PFAM: Mo-dependent nitrogenase family protein; SPTR: Mo-dependent nitrogenase-like. (95 aa)    
Predicted Functional Partners:
Chro_1006
PFAM: Bacterial transferase hexapeptide (three repeats); InterPro IPR001451; KEGG: naz:Aazo_1861 hexapaptide repeat-containing transferase; SPTR: Hexapaptide repeat-containing transferase.
  
     0.775
Chro_2204
PFAM: Domain of unknown function (DUF1830); InterPro IPR014964; KEGG: syn:sll0944 hypothetical protein; PFAM: Domain of unknown function DUF1830; SPTR: Putative uncharacterized protein.
  
     0.775
Chro_2822
PFAM: Domain of unknown function (DUF1830); InterPro IPR014964; KEGG: cyt:cce_2729 hypothetical protein; PFAM: Domain of unknown function DUF1830; SPTR: Putative uncharacterized protein.
  
     0.775
Chro_3299
PFAM: Domain of unknown function (DUF1830); InterPro IPR014964; KEGG: naz:Aazo_2793 hypothetical protein; PFAM: Domain of unknown function DUF1830; SPTR: Putative uncharacterized protein; manually curated.
  
     0.775
Chro_4388
PFAM: Domain of unknown function (DUF1830); InterPro IPR014964; KEGG: ana:alr4308 hypothetical protein; PFAM: Domain of unknown function DUF1830; SPTR: Alr4308 protein.
  
     0.775
Chro_4473
PFAM: Protein of unknown function (DUF2396); TIGRFAM: TIGR02652 family protein; InterPro IPR013472; KEGG: naz:Aazo_0329 hypothetical protein; PFAM: Conserved hypothetical protein CHP02652; SPTR: Putative uncharacterized protein.
  
     0.775
Chro_5462
PFAM: Domain of unknown function (DUF1830); InterPro IPR014964; KEGG: syn:sll0944 hypothetical protein; PFAM: Domain of unknown function DUF1830; SPTR: Putative uncharacterized protein.
  
     0.775
Chro_5607
KEGG: npu:Npun_R1856 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.775
Chro_1760
PFAM: Protein of unknown function (DUF2973); KEGG: npu:Npun_R5855 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.774
Chro_1013
PFAM: CO2 hydration protein (ChpXY); TIGRFAM: CO2 hydration protein; InterPro IPR010220; KEGG: ava:Ava_4475 CO2 hydration; PFAM: CO2 hydration family protein; SPTR: CO2 hydration; TIGRFAM: CO2 hydration protein.
  
     0.773
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.