STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_4239KEGG: cre:CHLREDRAFT_188544 hypothetical protein; SPTR: Predicted protein. (53 aa)    
Predicted Functional Partners:
Chro_4240
Transposase IS4 family protein; PFAM: Transposase DDE domain; InterPro IPR002559; KEGG: amr:AM1_A0223 hypothetical protein; PFAM: transposase IS4 family protein; SPTR: Putative uncharacterized protein.
       0.645
Chro_4241
Hypothetical protein; PFAM: BNR/Asp-box repeat; KEGG: eba:ebA6094 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.410
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.