STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
Chro_5539PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; COGs: COG4597 ABC-type amino acid transport system permease component; InterPro IPR000515:IPR010065; KEGG: ter:Tery_1999 polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: ABC-type permease for basic amino acids and glutamine; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit. (386 aa)    
Predicted Functional Partners:
Chro_5540
Neutral amino acid-binding protein; PFAM: Bacterial extracellular solute-binding proteins, family 3; COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; InterPro IPR001638:IPR018313; KEGG: ava:Ava_0740 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; SPTR: Extracellular solute-binding protein, family 3; L-glutamate-binding protein; L-aspartate-binding protein.
 
 
 0.984
Chro_5537
L-glutamate ABC transporter ATP-binding protein; PFAM: ABC transporter; COGs: COG1126 ABC-type polar amino acid transport system ATPase component; InterPro IPR003593:IPR003439:IPR017871; KEGG: ana:alr4167 ATP-binding protein of amino acid ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ATP-binding protein of amino acid ABC transporter; L-aspartate ABC transporter ATP-binding protein; neutral amino acid ABC transporter ATP-binding protein.
 
 
 0.983
Chro_5538
PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR000515:IPR010065; KEGG: ava:Ava_0738 amino acid ABC transporter permease; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Amino acid ABC transporter, permease protein, 3-TM region,His/Glu/Gln/Arg/opine; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; L-aspartate ABC transporter memb [...]
 
 
0.978
Chro_0924
PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR010065:IPR000515; KEGG: pfo:Pfl01_5461 amino acid ABC transporter permease; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: ABC transporter, permease protein, putative; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit.
 
0.967
Chro_0926
L-glutamate ABC transporter ATP-binding protein; PFAM: ABC transporter; COGs: COG1126 ABC-type polar amino acid transport system ATPase component; InterPro IPR003439:IPR017871:IPR003593; KEGG: cyt:cce_0948 ATP-binding protein of amino acid ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter, ATP-binding protein, putative; L-aspartate ABC transporter ATP-binding protein; neutral amino acid ABC transporter ATP-binding protein.
 
 
 0.965
Chro_4446
Arginine/lysine/histidine transporter system substrate-binding protein; PFAM: Binding-protein-dependent transport system inner membrane component; Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; COGs: COG0765 ABC-type amino acid transport system permease component; InterProIPR001320:IPR001638:IPR000515:IPR018313:IPR 010065; KEGG: npu:Npun_F6325 polar amino acid ABC transporter, inner membrane subunit; PFAM: extracellular solute-binding protein family 3; binding-protein-dependent [...]
 
0.830
Chro_5476
L-lysine ABC transporter ATP-binding protein; PFAM: ABC transporter; COGs: COG1126 ABC-type polar amino acid transport system ATPase component; InterPro IPR003593:IPR003439:IPR017871; KEGG: npu:Npun_R2875 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related; L-arginine ABC transporter ATP-binding protein; L-glutamine ABC transporter ATP-binding protein; L-histidine ABC transporter ATP-binding protein.
 
  
 0.824
Chro_4447
L-arginine ABC transporter ATP-binding protein; PFAM: ABC transporter; COGs: COG1126 ABC-type polar amino acid transport system ATPase component; InterPro IPR003593:IPR003439:IPR017871; KEGG: gwc:GWCH70_2289 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related.
 
  
 0.822
Chro_0925
PFAM: Bacterial extracellular solute-binding proteins, family 3; COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; InterPro IPR001638:IPR001320; KEGG: xau:Xaut_2073 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; SPTR: Bacterial extracellular solute-binding protein, family 3.
 
  
 0.764
Chro_4939
PFAM: Bacterial extracellular solute-binding proteins, family 3; COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; InterPro IPR001638:IPR018313; KEGG: ana:alr3429 glutamine-binding protein of glutamine ABC transporter; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; SPTR: Glutamine-binding protein of glutamine ABC transporter.
 
  
 0.746
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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