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dnaQ protein (Rickettsia typhi) - STRING interaction network
"dnaQ" - DNA polymerase III subunit epsilon in Rickettsia typhi
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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[Homology]
Score
dnaQDNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3’-5’ exonuclease (By similarity) (229 aa)    
Predicted Functional Partners:
dnaE
DNA polymerase III subunit alpha; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The alpha chain is the DNA polymerase (By similarity); Belongs to the DNA polymerase type-C family. DnaE subfamily (1180 aa)
   
  0.975
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (872 aa)
   
 
  0.949
dnaN
Beta sliding clamp; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3’-5’ exonuclease proofreading activity. The beta chain is required for initiation of replication as [...] (381 aa)
     
  0.941
rnhA
Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (152 aa)
 
   
  0.935
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate (140 aa)
   
 
  0.905
coaE
Dephospho-CoA kinase; Catalyzes the phosphorylation of the 3’-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family (191 aa)
   
        0.902
dcd
annotation not available (188 aa)
       
    0.900
dgtP
annotation not available (384 aa)
       
    0.900
RT0716
annotation not available (274 aa)
              0.900
rpoC
DNA-directed RNA polymerase subunit beta’; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1372 aa)
   
 
  0.896
Your Current Organism:
Rickettsia typhi
NCBI taxonomy Id: 257363
Other names: R. typhi str. Wilmington, Rickettsia typhi, Rickettsia typhi ATCC VR-144, Rickettsia typhi str. Wilmington
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