Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| RPA1025 | RPA3200 | RPA1025 | RPA3200 | Possible Ectothiorhodospira Vacuolata Cytochrome. | Putative dual serine/threonine-protein kinase/phosphatase. | 0.777 |
| RPA1025 | RPA3814 | RPA1025 | RPA3814 | Possible Ectothiorhodospira Vacuolata Cytochrome. | Calcium-binding EF-hand; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. | 0.492 |
| RPA1025 | aqpZ | RPA1025 | RPA2485 | Possible Ectothiorhodospira Vacuolata Cytochrome. | Aquaporin Z (water channel); Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity; Belongs to the MIP/aquaporin (TC 1.A.8) family. | 0.880 |
| RPA1025 | oxlT | RPA1025 | RPA1944 | Possible Ectothiorhodospira Vacuolata Cytochrome. | Possible oxalate/formate antiporter. | 0.436 |
| RPA1654 | aqpZ | RPA1654 | RPA2485 | Putative oxido-reductase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. | Aquaporin Z (water channel); Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity; Belongs to the MIP/aquaporin (TC 1.A.8) family. | 0.648 |
| RPA3138 | aqpZ | RPA3138 | RPA2485 | Putative glycerophosphoryl diester phosphodiesterase. | Aquaporin Z (water channel); Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity; Belongs to the MIP/aquaporin (TC 1.A.8) family. | 0.741 |
| RPA3138 | glpD | RPA3138 | RPA4410 | Putative glycerophosphoryl diester phosphodiesterase. | Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.803 |
| RPA3138 | glpK | RPA3138 | RPA3705 | Putative glycerophosphoryl diester phosphodiesterase. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.753 |
| RPA3200 | RPA1025 | RPA3200 | RPA1025 | Putative dual serine/threonine-protein kinase/phosphatase. | Possible Ectothiorhodospira Vacuolata Cytochrome. | 0.777 |
| RPA3200 | RPA3814 | RPA3200 | RPA3814 | Putative dual serine/threonine-protein kinase/phosphatase. | Calcium-binding EF-hand; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. | 0.896 |
| RPA3200 | aqpZ | RPA3200 | RPA2485 | Putative dual serine/threonine-protein kinase/phosphatase. | Aquaporin Z (water channel); Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity; Belongs to the MIP/aquaporin (TC 1.A.8) family. | 0.852 |
| RPA3200 | ndk | RPA3200 | RPA3056 | Putative dual serine/threonine-protein kinase/phosphatase. | Nucleoside-diphosphate-kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.503 |
| RPA3814 | RPA1025 | RPA3814 | RPA1025 | Calcium-binding EF-hand; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. | Possible Ectothiorhodospira Vacuolata Cytochrome. | 0.492 |
| RPA3814 | RPA3200 | RPA3814 | RPA3200 | Calcium-binding EF-hand; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. | Putative dual serine/threonine-protein kinase/phosphatase. | 0.896 |
| RPA3814 | aqpZ | RPA3814 | RPA2485 | Calcium-binding EF-hand; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. | Aquaporin Z (water channel); Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity; Belongs to the MIP/aquaporin (TC 1.A.8) family. | 0.911 |
| RPA3814 | ndk | RPA3814 | RPA3056 | Calcium-binding EF-hand; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. | Nucleoside-diphosphate-kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.886 |
| aqpZ | RPA1025 | RPA2485 | RPA1025 | Aquaporin Z (water channel); Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity; Belongs to the MIP/aquaporin (TC 1.A.8) family. | Possible Ectothiorhodospira Vacuolata Cytochrome. | 0.880 |
| aqpZ | RPA1654 | RPA2485 | RPA1654 | Aquaporin Z (water channel); Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity; Belongs to the MIP/aquaporin (TC 1.A.8) family. | Putative oxido-reductase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. | 0.648 |
| aqpZ | RPA3138 | RPA2485 | RPA3138 | Aquaporin Z (water channel); Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity; Belongs to the MIP/aquaporin (TC 1.A.8) family. | Putative glycerophosphoryl diester phosphodiesterase. | 0.741 |
| aqpZ | RPA3200 | RPA2485 | RPA3200 | Aquaporin Z (water channel); Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity; Belongs to the MIP/aquaporin (TC 1.A.8) family. | Putative dual serine/threonine-protein kinase/phosphatase. | 0.852 |
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