STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyc_0348Putative enoyl-CoA hydratase/isomerase family protein; Belongs to the enoyl-CoA hydratase/isomerase family. (270 aa)    
Predicted Functional Partners:
Psyc_0347
Putative signal transduction histidine kinase sensor.
  
 
 0.984
Psyc_0903
enoyl-CoA hydratase/isomerase family protein.
 
    0.787
Psyc_0753
Enoyl-CoA hydratase; Transmembrane protein; Belongs to the enoyl-CoA hydratase/isomerase family.
 
  
0.684
paaH
3-hydroxyacyl-CoA dehydrogenase.
 
 0.674
Psyc_1310
3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.652
Psyc_0252
Putative acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.603
Psyc_1169
Putative acetyl-CoA acyltransferase (thiolase); Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.603
fadA4
Probable thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.603
fadA
3-ketoacyl-CoA thiolase; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed.
  
 0.603
Psyc_0901
Putative acyl-CoA dehydrogenase.
 
  0.529
Your Current Organism:
Psychrobacter arcticus
NCBI taxonomy Id: 259536
Other names: P. arcticus 273-4, Psychrobacter arcticus 273-4, Psychrobacter arcticus str. 273-4, Psychrobacter arcticus strain 273-4, Psychrobacter sp. 273-4
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