STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mbur_0438Glycoside hydrolase family15; Evidence code ER3. (647 aa)    
Predicted Functional Partners:
Mbur_0436
Glycoside hydrolase family 57 protein; Evidence code ER4.
 
  
 0.894
Mbur_0437
Glycoside hydrolase family 57 protein; Evidence code ER4.
 
  
 0.894
Mbur_0439
Multifunctional (transferase/hydrolase) glycogen debranching enzyme; Evidence code ER3.
 
   
 0.840
Mbur_0435
Glycosyl transferase, group I; Evidence code ER3.
 
     0.751
Mbur_0415
Protein with cacluim-binding EF-hand domain; Evidence code ER4.
  
    0.498
Mbur_0433
Hypothetical protein; Evidence code ER5.
 
     0.498
Mbur_0266
Glycosyl transferase, group I; Evidence code ER3.
 
     0.477
Mbur_0434
UDP-galactose/glucose pyrophosphorylase; Evidence code ER3.
       0.445
Mbur_1163
Hypothetical protein; Evidence code ER5.
  
     0.438
Mbur_0706
Protein with nuclease-related domain; Evidence code ER4; NERD domain.
  
    0.412
Your Current Organism:
Methanococcoides burtonii
NCBI taxonomy Id: 259564
Other names: M. burtonii DSM 6242, Methanococcoides burtonii DSM 6242, Methanococcoides burtonii str. DSM 6242
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