STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mbur_1758Protein with ATP dependent DNA ligase domain; Evidence code ER4. (317 aa)    
Predicted Functional Partners:
Mbur_1678
Protein of unknown function UPF0278; RNA-free RNase P that catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. Belongs to the HARP family.
 
     0.842
selB
Translation elongation factor SELB; Evidence code ER3.
       0.647
Mbur_1759
Cystathionine beta-synthase domain-containing protein; Evidence code ER4.
       0.608
Mbur_2009
CAAX-amino-terminal protease family protein; Evidence code ER4.
  
     0.581
Mbur_2106
AAA ATPase; Evidence code ER3; Belongs to the AAA ATPase family.
  
     0.562
Mbur_1672
Protein of unknown function DUF166; Evidence code ER4.
 
     0.556
Mbur_1762
Cystathionine beta-synthase domain-containing protein; Evidence code ER4.
 
     0.553
Mbur_1760
Cystathionine beta-synthase domain-containing protein; Evidence code ER4.
       0.541
Mbur_1688
DNA polymerase B, delta subunit with exonuclease activity; Evidence code ER3.
 
    0.533
Mbur_1761
Cystathionine beta-synthase domain-containing protein; Evidence code ER4.
       0.529
Your Current Organism:
Methanococcoides burtonii
NCBI taxonomy Id: 259564
Other names: M. burtonii DSM 6242, Methanococcoides burtonii DSM 6242, Methanococcoides burtonii str. DSM 6242
Server load: medium (64%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.