STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssuBHypothetical protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. (251 aa)    
Predicted Functional Partners:
MAP_1807c
Hypothetical protein.
 
 0.998
MAP_1809c
Hypothetical protein.
 
 0.998
MAP_0146
Hypothetical protein.
 
 0.993
MAP_0145
Hypothetical protein.
 
 
 0.991
MAP_4013
Hypothetical protein.
 
 
 0.972
MAP_1082c
Hypothetical protein.
 
 
 0.946
MAP_0144
Hypothetical protein.
  
  
 
0.910
MAP_1109
Hypothetical protein.
  
 0.855
cobN
CobN.
       0.732
MAP_1806c
Hypothetical protein.
       0.731
Your Current Organism:
Mycobacterium avium
NCBI taxonomy Id: 262316
Other names: M. avium subsp. paratuberculosis K-10, Mycobacterium avium subsp. paratuberculosis K-10, Mycobacterium avium subsp. paratuberculosis K10, Mycobacterium avium subsp. paratuberculosis str. K-10, Mycobacterium avium subsp. paratuberculosis strain K-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.