Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MAP_0384 | MAP_2225c | MAP_0384 | MAP_2225c | Hypothetical protein. | Hypothetical protein. | 0.700 |
MAP_0384 | pepD | MAP_0384 | MAP_2287 | Hypothetical protein. | PepD. | 0.681 |
MAP_0384 | rbpA | MAP_0384 | MAP_1798 | Hypothetical protein. | Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family. | 0.772 |
MAP_0384 | rpoZ | MAP_0384 | MAP_1124 | Hypothetical protein. | Hypothetical protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.737 |
MAP_0384 | xseB | MAP_0384 | MAP_2687 | Hypothetical protein. | XseB; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. | 0.686 |
MAP_2225c | MAP_0384 | MAP_2225c | MAP_0384 | Hypothetical protein. | Hypothetical protein. | 0.700 |
MAP_2225c | pepD | MAP_2225c | MAP_2287 | Hypothetical protein. | PepD. | 0.568 |
MAP_2225c | rbpA | MAP_2225c | MAP_1798 | Hypothetical protein. | Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family. | 0.769 |
MAP_2225c | rpoZ | MAP_2225c | MAP_1124 | Hypothetical protein. | Hypothetical protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.552 |
MAP_2225c | xseB | MAP_2225c | MAP_2687 | Hypothetical protein. | XseB; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. | 0.723 |
MAP_2685 | MAP_2688 | MAP_2685 | MAP_2688 | Hypothetical protein. | Hypothetical protein. | 0.773 |
MAP_2685 | lytB | MAP_2685 | MAP_2684c | Hypothetical protein. | LytB; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | 0.751 |
MAP_2685 | xseA | MAP_2685 | MAP_2686 | Hypothetical protein. | XseA; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. | 0.875 |
MAP_2685 | xseB | MAP_2685 | MAP_2687 | Hypothetical protein. | XseB; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. | 0.875 |
MAP_2688 | MAP_2685 | MAP_2688 | MAP_2685 | Hypothetical protein. | Hypothetical protein. | 0.773 |
MAP_2688 | lytB | MAP_2688 | MAP_2684c | Hypothetical protein. | LytB; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | 0.521 |
MAP_2688 | xseA | MAP_2688 | MAP_2686 | Hypothetical protein. | XseA; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. | 0.773 |
MAP_2688 | xseB | MAP_2688 | MAP_2687 | Hypothetical protein. | XseB; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. | 0.783 |
lytB | MAP_2685 | MAP_2684c | MAP_2685 | LytB; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | Hypothetical protein. | 0.751 |
lytB | MAP_2688 | MAP_2684c | MAP_2688 | LytB; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | Hypothetical protein. | 0.521 |
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