Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MAP_2540c | citA | MAP_2540c | MAP_0827c | Hypothetical protein. | CitA; Belongs to the citrate synthase family. | 0.860 |
MAP_2540c | fum | MAP_2540c | MAP_2693 | Hypothetical protein. | Fum; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.963 |
MAP_2540c | glcB | MAP_2540c | MAP_1549c | Hypothetical protein. | GlcB; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | 0.922 |
MAP_2540c | gltA1 | MAP_2540c | MAP_0295c | Hypothetical protein. | GltA1; Belongs to the citrate synthase family. | 0.859 |
MAP_2540c | gltA2 | MAP_2540c | MAP_0829 | Hypothetical protein. | GltA2; Belongs to the citrate synthase family. | 0.859 |
MAP_2540c | mdh | MAP_2540c | MAP_2541c | Hypothetical protein. | Mdh; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | 0.994 |
MAP_2540c | mqo | MAP_2540c | MAP_2921c | Hypothetical protein. | Hypothetical protein. | 0.919 |
MAP_2540c | pca | MAP_2540c | MAP_0294c | Hypothetical protein. | Pca; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.968 |
MAP_2540c | pckA | MAP_2540c | MAP_3646 | Hypothetical protein. | PckA; Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle; Belongs to the phosphoenolpyruvate carboxykinase [GTP] family. | 0.579 |
MAP_2540c | ppc | MAP_2540c | MAP_1169 | Hypothetical protein. | Ppc; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle. | 0.484 |
citA | MAP_2540c | MAP_0827c | MAP_2540c | CitA; Belongs to the citrate synthase family. | Hypothetical protein. | 0.860 |
citA | fum | MAP_0827c | MAP_2693 | CitA; Belongs to the citrate synthase family. | Fum; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.929 |
citA | glcB | MAP_0827c | MAP_1549c | CitA; Belongs to the citrate synthase family. | GlcB; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | 0.959 |
citA | gltA1 | MAP_0827c | MAP_0295c | CitA; Belongs to the citrate synthase family. | GltA1; Belongs to the citrate synthase family. | 0.937 |
citA | gltA2 | MAP_0827c | MAP_0829 | CitA; Belongs to the citrate synthase family. | GltA2; Belongs to the citrate synthase family. | 0.964 |
citA | mdh | MAP_0827c | MAP_2541c | CitA; Belongs to the citrate synthase family. | Mdh; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | 0.992 |
citA | mqo | MAP_0827c | MAP_2921c | CitA; Belongs to the citrate synthase family. | Hypothetical protein. | 0.944 |
citA | pca | MAP_0827c | MAP_0294c | CitA; Belongs to the citrate synthase family. | Pca; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.953 |
citA | pckA | MAP_0827c | MAP_3646 | CitA; Belongs to the citrate synthase family. | PckA; Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle; Belongs to the phosphoenolpyruvate carboxykinase [GTP] family. | 0.914 |
citA | ppc | MAP_0827c | MAP_1169 | CitA; Belongs to the citrate synthase family. | Ppc; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle. | 0.872 |
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