STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Exig_0275Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer. (342 aa)    
Predicted Functional Partners:
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 0.985
Exig_1660
PFAM: Aldose 1-epimerase; KEGG: gtn:GTNG_1777 aldose 1-epimerase.
  
  
 
0.929
Exig_0376
PFAM: glycoside hydrolase clan GH-D; KEGG: sus:Acid_0933 glycoside hydrolase, clan GH-D.
 
 
  0.923
Exig_0874
TIGRFAM: glucokinase, ROK family; PFAM: ROK family protein; ATPase BadF/BadG/BcrA/BcrD type; KEGG: bha:BH1425 glucose kinase.
 
 
 0.920
Exig_0375
Beta-galactosidase; PFAM: Glycoside hydrolase family 42 domain protein; Beta-galactosidase trimerisation domain protein; Beta-galactosidase domain protein; KEGG: lic:LIC10031 beta-galactosidase.
  
 
 0.909
Exig_0380
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
  
 
0.909
Exig_1655
Beta-galactosidase; PFAM: Glycoside hydrolase family 42 domain protein; Beta-galactosidase trimerisation domain protein; Beta-galactosidase domain protein; KEGG: bha:BH2022 beta-galactosidase.
  
 
 0.909
Exig_0276
TIGRFAM: degV family protein; PFAM: DegV family protein; KEGG: lsl:LSL_0875 DegV family protein.
       0.568
galT
UDP-glucose--hexose-1-phosphate uridylyltransferase; PFAM: galactose-1-phosphate uridyl transferase domain protein; KEGG: bld:BLi04284 galactose-1-phosphate uridylyltransferase.
 
  
 0.532
Exig_0274
Signal transduction histidine kinase, LytS; PFAM: ATP-binding region ATPase domain protein; 5TM Receptors of the LytS-YhcK type transmembrane region; KEGG: bsu:BSU28930 two-component sensor histidine kinase.
       0.522
Your Current Organism:
Exiguobacterium sibiricum
NCBI taxonomy Id: 262543
Other names: E. sibiricum 255-15, Exiguobacterium sibiricum 255-15, Exiguobacterium sibiricum str. 255-15, Exiguobacterium sibiricum strain 255-15, Exiguobacterium sp. 255-15, Exiguobacterium strain 255-15
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