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mgsA protein (Exiguobacterium sibiricum) - STRING interaction network
"mgsA" - Methylglyoxal synthase in Exiguobacterium sibiricum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mgsAMethylglyoxal synthase (144 aa)    
Predicted Functional Partners:
Exig_1181
Glycerol dehydrogenase (369 aa)
     
 
  0.912
ldh
L-lactate dehydrogenase (317 aa)
         
  0.821
coaE
dephospho-CoA kinase; Catalyzes the phosphorylation of the 3’-hydroxyl group of dephosphocoenzyme A to form coenzyme A (195 aa)
            0.777
Exig_0720
long-chain-fatty-acid--CoA ligase (515 aa)
              0.632
Exig_0931
Diacylglycerol kinase catalytic subunit (296 aa)
            0.629
Exig_0722
Hypothetical protein (46 aa)
              0.574
Exig_1783
Group 1 glycosyl transferase (380 aa)
         
  0.466
Exig_0719
Short-chain dehydrogenase/reductase SDR (295 aa)
              0.428
Exig_2202
DNA polymerase I (865 aa)
   
        0.427
Exig_2116
DNA repair protein RadC (217 aa)
              0.405
Your Current Organism:
Exiguobacterium sibiricum
NCBI taxonomy Id: 262543
Other names: E. sibiricum, E. sibiricum 255-15, Exiguobacterium sibiricum, Exiguobacterium sibiricum 255-15, Exiguobacterium sibiricum Rodrigues et al. 2006, Exiguobacterium sibiricum str. 255-15, Exiguobacterium sibiricum strain 255-15, Exiguobacterium sp. 255-15, Exiguobacterium sp. 7-3, Exiguobacterium strain 255-15
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