STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Exig_30262-alkenal reductase; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: gka:GK3469 serine protease Do. (430 aa)    
Predicted Functional Partners:
Exig_1072
2-alkenal reductase; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: lin:lin0320 similar to heat-shock protein htrA serine protease.
  
  
 
0.903
Exig_3027
PFAM: beta-lactamase domain protein; KEGG: bay:RBAM_037360 YycJ.
  
  
 0.626
Exig_3028
KEGG: bpu:BPUM_3686 hypothetical protein.
  
  
 0.620
Exig_3031
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bld:BLi04335 YycF.
  
  
 0.592
Exig_3029
PFAM: YycH family protein; KEGG: lwe:lwe0263 putative secreted YycH family protein.
  
  
 0.568
Exig_3030
Multi-sensor signal transduction histidine kinase; KEGG: gka:GK3473 two-component sensor histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
 
  
 0.568
Exig_2593
Conserved hypothetical protein containing Ankyrin -like repeat; KEGG: tva:TVAG_113040 ankyrin repeat protein, putative Pfam: Ank PROSITE: ANK_REPEAT ANK_REP_REGION.
 
 0.566
atpD
ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.
  
  
 0.520
Exig_0562
NmrA family protein; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; NmrA family protein; KEGG: bpu:BPUM_1854 hypothetical protein.
   
   0.518
Exig_1896
KEGG: gtn:GTNG_1056 type I signal peptidase; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein; Belongs to the peptidase S26 family.
 
   
 0.507
Your Current Organism:
Exiguobacterium sibiricum
NCBI taxonomy Id: 262543
Other names: E. sibiricum 255-15, Exiguobacterium sibiricum 255-15, Exiguobacterium sibiricum str. 255-15, Exiguobacterium sibiricum strain 255-15, Exiguobacterium sp. 255-15, Exiguobacterium strain 255-15
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.