STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SC1_02471Alkanesulfonates-binding protein. (327 aa)    
Predicted Functional Partners:
SC1_02472
Alkanesulfonates transport system permease protein.
 
 
 0.996
ssuB
Alkanesulfonates ABC transporter ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
 
 0.995
SC1_03204
Alkanesulfonate monooxygenase.
 
 
 0.943
SC1_02470
Alpha-ketoglutarate-dependent taurine dioxygenase.
 
 
  0.900
SC1_02933
Hydroxymethylpyrimidine ABC transporter, transmembrane component.
 
 
 0.894
SC1_02932
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
 
 0.845
SC1_02907
Assimilatory nitrate reductase large subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
    
 0.780
SC1_03191
Putative NADPH-dependent FMN reductase.
  
 
  0.623
SC1_03488
Alpha-ketoglutarate-dependent taurine dioxygenase.
 
 
  0.609
cysC
Sulfate adenylyltransferase subunit 1; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
  
  
 0.559
Your Current Organism:
Sphingopyxis sp. C1
NCBI taxonomy Id: 262667
Other names: S. sp. C-1, Sphingopyxis sp. C-1
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