node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TT_C0497 | TT_C0638 | TT_C0497 | TT_C0638 | annotation not available | annotation not available | 0.543 |
TT_C0497 | recX | TT_C0497 | TT_C0496 | annotation not available | Regulatory protein recx; Modulates RecA activity | 0.874 |
TT_C0638 | TT_C0497 | TT_C0638 | TT_C0497 | annotation not available | annotation not available | 0.543 |
TT_C0638 | mutL | TT_C0638 | TT_C0959 | annotation not available | Dna mismatch repair enzyme (predicted atpase); This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex | 0.667 |
TT_C0638 | radA | TT_C0638 | TT_C0173 | annotation not available | Dna repair protein rada/sms; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function | 0.628 |
TT_C0638 | recA | TT_C0638 | TT_C1466 | annotation not available | Recombination protein reca; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage | 0.815 |
TT_C0638 | recX | TT_C0638 | TT_C0496 | annotation not available | Regulatory protein recx; Modulates RecA activity | 0.817 |
TT_C0638 | ruvB | TT_C0638 | TT_C0038 | annotation not available | The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing | 0.656 |
TT_C0638 | ruvC | TT_C0638 | TT_C0725 | annotation not available | Crossover junction endodeoxyribonuclease ruvc; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group | 0.732 |
TT_C0638 | sbcD | TT_C0638 | TT_C0923 | annotation not available | Dna repair protein sbcd/mre11; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity | 0.787 |
TT_C0638 | topA | TT_C0638 | TT_C1931 | annotation not available | Dna topoisomerase i; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.828 |
cinA | radA | TT_C1468 | TT_C0173 | Nicotinamide-nucleotide amidase; Belongs to the CinA family | Dna repair protein rada/sms; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function | 0.605 |
cinA | recA | TT_C1468 | TT_C1466 | Nicotinamide-nucleotide amidase; Belongs to the CinA family | Recombination protein reca; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage | 0.980 |
cinA | recX | TT_C1468 | TT_C0496 | Nicotinamide-nucleotide amidase; Belongs to the CinA family | Regulatory protein recx; Modulates RecA activity | 0.727 |
mutL | TT_C0638 | TT_C0959 | TT_C0638 | Dna mismatch repair enzyme (predicted atpase); This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex | annotation not available | 0.667 |
mutL | radA | TT_C0959 | TT_C0173 | Dna mismatch repair enzyme (predicted atpase); This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex | Dna repair protein rada/sms; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function | 0.725 |
mutL | recA | TT_C0959 | TT_C1466 | Dna mismatch repair enzyme (predicted atpase); This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex | Recombination protein reca; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage | 0.898 |
mutL | recX | TT_C0959 | TT_C0496 | Dna mismatch repair enzyme (predicted atpase); This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex | Regulatory protein recx; Modulates RecA activity | 0.762 |
mutL | ruvB | TT_C0959 | TT_C0038 | Dna mismatch repair enzyme (predicted atpase); This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex | The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing | 0.688 |
mutL | ruvC | TT_C0959 | TT_C0725 | Dna mismatch repair enzyme (predicted atpase); This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex | Crossover junction endodeoxyribonuclease ruvc; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group | 0.788 |